[ etiona ]
[ Paquet source : tophat ]
Paquet : tophat (2.1.1+dfsg1-1)
Liens pour tophat
Ressources Trisquel :
Télécharger le paquet source tophat :
Responsable :
Original Maintainers:
- Debian Med Packaging Team (Archive du courrier électronique)
- Carlos Borroto
- Alexandre Mestiashvili
- Andreas Tille
Ressources externes :
- Page d'accueil [ccb.jhu.edu]
Paquets similaires :
fast splice junction mapper for RNA-Seq reads
TopHat aligns RNA-Seq reads to mammalian-sized genomes using the ultra high-throughput short read aligner Bowtie, and then analyzes the mapping results to identify splice junctions between exons. TopHat is a collaborative effort between the University of Maryland Center for Bioinformatics and Computational Biology and the University of California, Berkeley Departments of Mathematics and Molecular and Cell Biology.
Autres paquets associés à tophat
|
|
|
-
- dep: libboost-system1.65.1
- Operating system (e.g. diagnostics support) library
-
- dep: libboost-thread1.65.1
- portable C++ multi-threading
-
- dep: libc6 (>= 2.15)
- GNU C Library: Shared libraries
un paquet virtuel est également fourni par libc6-udeb
-
- dep: libgcc1 (>= 1:3.0)
- GCC support library
-
- dep: libstdc++6 (>= 5.2)
- GNU Standard C++ Library v3
-
- dep: python
- interactive high-level object-oriented language (default version)
-
- dep: samtools (>= 1.5)
- processing sequence alignments in SAM and BAM formats
-
- dep: zlib1g (>= 1:1.2.3.3)
- compression library - runtime
-
- sug: cufflinks
- Paquet indisponible
Télécharger tophat
| Architecture | Taille du paquet | Espace occupé une fois installé | Fichiers |
|---|---|---|---|
| amd64 | 659,8 ko | 3807 ko | [liste des fichiers] |