Skip to content
Sections
>> Trisquel >> Paquets >> etiona >> science >> velvet
etiona  ] [  nabia  ] [  aramo  ]
[ Paquet source : velvet  ]

Paquet : velvet (1.2.10+dfsg1-3build1)

Nucleic acid sequence assembler for very short reads

Velvet is a de novo genomic assembler specially designed for short read sequencing technologies, such as Solexa or 454, developed by Daniel Zerbino and Ewan Birney at the European Bioinformatics Institute (EMBL-EBI), near Cambridge, in the United Kingdom.

Velvet currently takes in short read sequences, removes errors then produces high quality unique contigs. It then uses paired read information, if available, to retrieve the repeated areas between contigs.

Autres paquets associés à velvet

  • dépendances
  • recommandations
  • suggestions
  • dep: libc6 (>= 2.14) [amd64]
    GNU C Library: Shared libraries
    un paquet virtuel est également fourni par libc6-udeb
    dep: libc6 (>= 2.7) [i386]
  • dep: libgomp1 (>= 4.9)
    GCC OpenMP (GOMP) support library
  • dep: zlib1g (>= 1:1.2.0.2)
    compression library - runtime

Télécharger velvet

Télécharger pour toutes les architectures proposées
Architecture Taille du paquet Espace occupé une fois installé Fichiers
amd64 661,8 ko1273 ko [liste des fichiers]
i386 689,7 ko1461 ko [liste des fichiers]