[  etiona  ] [  nabia  ] [  aramo  ]

[ Paquet source : r-bioc-variantannotation  ]

Liens pour r-bioc-variantannotation

Ressources Trisquel :

• Install using apturl
• Entry at directory.fsf.org
• Rapports de bogues
• Changelog
• Fichier de licence

Télécharger le paquet source r-bioc-variantannotation :

• [r-bioc-variantannotation_1.32.0-1.dsc]
• [r-bioc-variantannotation_1.32.0.orig.tar.gz]
• [r-bioc-variantannotation_1.32.0-1.debian.tar.xz]

Responsable :

• Debian R Packages Maintainers

Original Maintainers:

• Debian R Packages Maintainers
• Andreas Tille

Ressources externes :

• Page d'accueil [bioconductor.org]

Paquets similaires :

• snpeff
• r-bioc-annotationdbi
• r-bioc-annotate
• r-bioc-org.hs.eg.db
• r-bioc-go.db
• r-bioc-snpstats
• vt-examples
• vt
• r-bioc-affy
• r-bioc-qtlizer
• python3-geneimpacts

Autres paquets associés à r-bioc-variantannotation

dépendances

recommandations

suggestions

• dep: libc6 (>= 2.15)

  GNU C Library: Shared libraries
  un paquet virtuel est également fourni par libc6-udeb

• dep: libcurl4 (>= 7.18.0)

  easy-to-use client-side URL transfer library (OpenSSL flavour)

• dep: r-api-3.5

  paquet virtuel fourni par r-base-core

• dep: r-api-bioc-3.10

  paquet virtuel fourni par r-bioc-biocgenerics

• dep: r-base-core (>= 3.6.1-7)

  GNU R core of statistical computation and graphics system

• dep: r-bioc-annotationdbi (>= 1.27.9)

  GNU R Annotation Database Interface for BioConductor

• dep: r-bioc-biobase

  base functions for Bioconductor

• dep: r-bioc-biocgenerics (>= 0.15.3)

  generic functions for Bioconductor

• dep: r-bioc-biostrings (>= 2.47.6)

  GNU R string objects representing biological sequences

• dep: r-bioc-bsgenome (>= 1.47.3)

  BioConductor infrastructure for Biostrings-based genome data packages

• dep: r-bioc-genomeinfodb (>= 1.15.2)

  BioConductor utilities for manipulating chromosome identifiers

• dep: r-bioc-genomicfeatures (>= 1.31.3)

  GNU R tools for making and manipulating transcript centric annotations

• dep: r-bioc-genomicranges (>= 1.37.4)

  BioConductor representation and manipulation of genomic intervals

• dep: r-bioc-iranges (>= 2.13.13)

  GNU R low-level containers for storing sets of integer ranges

• dep: r-bioc-rsamtools (>= 1.99.0)

  GNU R binary alignment (BAM), variant call (BCF), or tabix file import

• dep: r-bioc-rtracklayer (>= 1.39.7)

  GNU R interface to genome browsers and their annotation tracks

• dep: r-bioc-s4vectors (>= 0.17.24)

  BioConductor S4 implementation of vectors and lists

• dep: r-bioc-summarizedexperiment (>= 1.9.9)

  BioConductor assay container

• dep: r-bioc-xvector (>= 0.19.7)

  BioConductor representation and manpulation of external sequences

• dep: r-bioc-zlibbioc

  (Virtual) zlibbioc Bioconductor package

• dep: r-cran-dbi

  GNU R package providing a generic database interface

• rec: r-bioc-snpstats

  BioConductor SnpMatrix and XSnpMatrix classes and methods

• rec: r-cran-runit

  GNU R package providing unit testing framework

• sug: r-bioc-annotationhub

  GNU R client to access AnnotationHub resources

• sug: r-cran-ggplot2

  implementation of the Grammar of Graphics

Télécharger r-bioc-variantannotation

Télécharger pour toutes les architectures proposées

Architecture	Taille du paquet	Espace occupé une fois installé	Fichiers
armhf	3 053,2 ko	4239 ko	[liste des fichiers]