Paquet : repeatmasker-recon (1.08-4)
Liens pour repeatmasker-recon
Ressources Trisquel :
Télécharger le paquet source repeatmasker-recon :
- [repeatmasker-recon_1.08-4.dsc]
- [repeatmasker-recon_1.08.orig.tar.gz]
- [repeatmasker-recon_1.08-4.debian.tar.xz]
Responsable :
Original Maintainers:
- Debian Med Packaging Team (Archive du courrier électronique)
- Olivier Sallou
- Andreas Tille
Ressources externes :
- Page d'accueil [www.repeatmasker.org]
Paquets similaires :
finds repeat families from biological sequences
The RECON package implements a de novo algorithm for the identification of repeat families from biological sequences.
The program implements an approach for the de novo identification and classification of repeat sequence families that is based on extensions to the usual approach of single linkage clustering of local pairwise alignments between genomic sequences. The extensions use multiple alignment information to define the boundaries of individual copies of the repeats and to distinguish homologous but distinct repeat element families. When tested on the human genome, this approach was able to properly identify and group known transposable elements. The program, should be useful for first-pass automatic classification of repeats in newly sequenced genomes.
Autres paquets associés à repeatmasker-recon
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- dep: libc6 (>= 2.7)
- GNU C Library: Shared libraries
un paquet virtuel est également fourni par libc6-udeb
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- dep: perl
- Larry Wall's Practical Extraction and Report Language
Télécharger repeatmasker-recon
| Architecture | Taille du paquet | Espace occupé une fois installé | Fichiers |
|---|---|---|---|
| amd64 | 99,9 ko | 223 ko | [liste des fichiers] |
| armhf | 94,9 ko | 191 ko | [liste des fichiers] |