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Package: murasaki-common (1.68.6-13build1)

Links for murasaki-common

murasaki-common

Trisquel Resources:

Download Source Package murasaki:

Maintainer:

Original Maintainers:

  • Debian Med Packaging Team (Mail Archive)
  • Andreas Tille
  • Nilesh Patra

External Resources:

  • Homepage [murasaki.dna.bio.keio.ac.jp]

Similar packages:

homology detection tool across multiple large genomes (common files)

Murasaki is a scalable and fast, language theory-based homology detection tool across multiple large genomes. It enable whole-genome scale multiple genome global alignments. Supports unlimited length gapped-seed patterns and unique TF-IDF based filtering.

Murasaki is an anchor alignment software, which is

 * exteremely fast (17 CPU hours for whole Human x Mouse genome (with
   40 nodes: 52 wall minutes))
 * scalable (Arbitrarily parallelizable across multiple nodes using MPI.
   Even a single node with 16GB of ram can handle over 1Gbp of sequence.)
 * unlimited pattern length
 * repeat tolerant
 * intelligent noise reduction

This package contains all files that are common to the single core murasaki package and the multi core murasaki-mpi package.

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Download murasaki-common

Download for all available architectures
Architecture Package Size Installed Size Files
all 144.3 kB433 kB [list of files]