Skip to content
Sections
>> Trisquel >> Packages >> aramo >> gnu-r >> r-cran-tcr
[  nabia  ] [  aramo  ]
[ Source: r-cran-tcr  ]

Package: r-cran-tcr (2.3.2+ds-1)

Links for r-cran-tcr

r-cran-tcr

Trisquel Resources:

Download Source Package r-cran-tcr:

Maintainer:

Original Maintainers:

  • Debian R Packages Maintainers
  • Steffen Moeller

External Resources:

Similar packages:

Advanced Data Analysis of Immune Receptor Repertoires

Cells of the immune system are the grand exception to the rule that all cells of an individuum have (mostly exact) copies of the same DNA. B cells (which produce antibodies) and T cells (which communicate with cells) however have a section of their DNA with genes of the groups V, D and J that are reorganised within the genomic DNA to provide the flexibility to deal with yet unknown pathogens.

This package provides a platform for the advanced analysis of T cell receptor repertoire data and its visualisations.

Caveat: This package is soon to be replaced by http://github.com/immunomind/immunarch which is not yet available as a Debian package.

Other Packages Related to r-cran-tcr

  • depends
  • recommends
  • suggests
  • dep: libc6 (>= 2.17)
    GNU C Library: Shared libraries
    also a virtual package provided by libc6-udeb
  • dep: libgcc-s1 (>= 3.0)
    GCC support library
  • dep: libstdc++6 (>= 5.2)
    GNU Standard C++ Library v3
  • dep: r-api-4.0
    virtual package provided by r-base-core
  • dep: r-base-core (>= 4.0.1-1)
    GNU R core of statistical computation and graphics system
  • dep: r-cran-data.table (>= 1.9.0)
    GNU R extension of Data.frame
  • dep: r-cran-dplyr (>= 0.4.0)
    GNU R grammar of data manipulation
  • dep: r-cran-ggplot2 (>= 1.0.0)
    implementation of the Grammar of Graphics
  • dep: r-cran-gridextra (>= 0.9.0)
    GNU R package with extensions for the grid package
  • dep: r-cran-gtable (>= 0.1.2)
    Arrange grobs in tables
  • dep: r-cran-igraph (>= 0.7.1)
    GNU R network analysis and visualization
  • dep: r-cran-rcpp (>= 0.11.1)
    GNU R package for Seamless R and C++ Integration
  • dep: r-cran-reshape2 (>= 1.2.0)
    Flexibly reshape data: a reboot of the reshape package
  • dep: r-cran-scales (>= 0.3.0)
    Scale functions for visualization
  • dep: r-cran-stringdist (>= 0.7.3)
    GNU R approximate string matching and string distance functions
  • sug: r-cran-knitr (>= 1.8)
    GNU R package for dynamic report generation using Literate Programming
  • sug: r-cran-rmarkdown (>= 1.0)
    convert R markdown documents into a variety of formats
  • sug: r-cran-roxygen2 (>= 3.0.0)
    in-line documentation for GNU R

Download r-cran-tcr

Download for all available architectures
Architecture Package Size Installed Size Files
arm64 1,910.4 kB2105 kB [list of files]