Package: python3-pdb2pqr (3.6.1+dfsg-1)

Links for python3-pdb2pqr

Trisquel Resources:

Download Source Package pdb2pqr:

Maintainer:

Debian Med Packaging Team (Mail Archive)

Original Maintainers:

Debian Med Packaging Team (Mail Archive)
Steffen Moeller
Manuel Prinz
Andreas Tille

External Resources:

Homepage [www.poissonboltzmann.org]

Similar packages:

Preparation of protein structures for electrostatics calculations

PDB2PQR is a Python software package that automates many of the common tasks of preparing structures for continuum electrostatics calculations. It thus provides a platform-independent utility for converting protein files in PDB format to PQR format. These tasks include:

 * Adding a limited number of missing heavy atoms to biomolecular structures
 * Determining side-chain pKas
 * Placing missing hydrogens
 * Optimizing the protein for favorable hydrogen bonding
 * Assigning charge and radius parameters from a variety of force fields

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