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Package: r-bioc-bsgenome (1.46.0-1)

BioConductor infrastructure for Biostrings-based genome data packages

This BioConductor module provides some basic infrastructure for Biostrings-based genome data packages.

Other Packages Related to r-bioc-bsgenome

  • depends
  • recommends
  • suggests
  • dep: r-api-3.4
    virtual package provided by r-base-core
  • dep: r-base-core (>= 3.4.2-1ubuntu4)
    GNU R core of statistical computation and graphics system
  • dep: r-bioc-biocgenerics (>= 0.13.8)
    generic functions for Bioconductor
  • dep: r-bioc-biostrings (>= 2.35.3)
    GNU R string objects representing biological sequences
  • dep: r-bioc-genomeinfodb (>= 1.13.1)
    BioConductor utilities for manipulating chromosome identifiers
  • dep: r-bioc-genomicranges (>= 1.29.14)
    BioConductor representation and manipulation of genomic intervals
  • dep: r-bioc-iranges (>= 2.11.16)
    GNU R low-level containers for storing sets of integer ranges
  • dep: r-bioc-rsamtools
    GNU R binary alignment (BAM), variant call (BCF), or tabix file import
  • dep: r-bioc-rtracklayer (>= 1.25.8)
    GNU R interface to genome browsers and their annotation tracks
  • dep: r-bioc-s4vectors (>= 0.9.36)
    BioConductor S4 implementation of vectors and lists
  • dep: r-bioc-xvector
    BioConductor representation and manpulation of external sequences

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