Package: gbrowse (2.56+dfsg-3build1)

Links for gbrowse

Trisquel Resources:

Download Source Package gbrowse:

Maintainer:

Ubuntu Developers (Mail Archive)

Original Maintainers:

Debian Med Packaging Team (Mail Archive)
Olivier Sallou
Charles Plessy
Aaron M. Ucko
Andreas Tille

External Resources:

Homepage [www.gbrowse.org]

Similar packages:

GMOD Generic Genome Browser

Generic Genome Browser is a simple but highly configurable web-based genome browser. It is a component of the Generic Model Organism Systems Database project (GMOD). Some of its features:

 * Simultaneous bird's eye and detailed views of the genome;
 * Scroll, zoom, center;
 * Attach arbitrary URLs to any annotation;
 * Order and appearance of tracks are customizable by administrator and
   end-user;
 * Search by annotation ID, name, or comment;
 * Supports third party annotation using GFF formats;
 * Settings persist across sessions;
 * DNA and GFF dumps;
 * Connectivity to different databases, including BioSQL and Chado;
 * Multi-language support;
 * Third-party feature loading;
 * Customizable plug-in architecture (e.g. run BLAST, dump & import many
   formats, find oligonucleotides, design primers, create restriction maps,
   edit features).

Other Packages Related to gbrowse

depends

recommends

suggests

dep: apache2 (>= 2.4)

Apache HTTP Server

or httpd-cgi

virtual package provided by aolserver4-core, aolserver4-daemon, apache2, lighttpd, mini-httpd, nginx-core, nginx-extras, nginx-full, nginx-light, tntnet, yaws
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dep: sqlite3

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rec: apache2 (>= 2.4.6-4~)

Apache HTTP Server

or httpd

virtual package provided by aolserver4-core, aolserver4-daemon, apache2, ebhttpd, lighttpd, micro-httpd, mini-httpd, nginx-core, nginx-extras, nginx-full, nginx-light, tntnet, webfs, yaws

sug: gbrowse-calign

CAlign helper
sug: gbrowse-data

Sample data to use GBrowse
sug: libfile-nfslock-perl

perl module to do NFS (or not) locking

Download gbrowse

Download for all available architectures
Architecture	Package Size	Installed Size	Files
all	2,129.0 kB	6996 kB	[list of files]

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