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Package: hmmer (3.1b2+dfsg-5ubuntu1)

profile hidden Markov models for protein sequence analysis

HMMER is an implementation of profile hidden Markov model methods for sensitive searches of biological sequence databases using multiple sequence alignments as queries.

Given a multiple sequence alignment as input, HMMER builds a statistical model called a "hidden Markov model" which can then be used as a query into a sequence database to find (and/or align) additional homologues of the sequence family.

Other Packages Related to hmmer

  • depends
  • recommends
  • suggests
  • dep: libc6 (>= 2.15)
    GNU C Library: Shared libraries
    also a virtual package provided by libc6-udeb
  • dep: libdivsufsort3 (>= 2.0.1)
    fast suffix array construction
  • sug: hmmer-doc (>= 3.1b2+dfsg-5ubuntu1)
    profile hidden Markov models for protein sequence analysis (docs)

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Architecture Package Size Installed Size Files
amd64 1,093.3 kB11489 kB [list of files]
i386 1,169.9 kB12525 kB [list of files]