[ Source: libssw ]
Package: ssw-align (1.1-1)
Links for ssw-align
Trisquel Resources:
Download Source Package libssw:
Maintainer:
Original Maintainers:
- Debian Med Packaging Team (Mail Archive)
- Sascha Steinbiss
External Resources:
- Homepage [github.com]
Similar packages:
Smith-Waterman aligner based on libssw
This package provides a command-line aligner based on the libssw library, a fast SIMD accelerated implementation of the Smith-Waterman algorithm. The input files can be in FASTA or FASTQ format. Both target and query files can contain multiple sequences. Each sequence in the query file will be aligned with all sequences in the target file. Output is provided in SAM or BLAST-like text format.
Other Packages Related to ssw-align
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- dep: libc6 (>= 2.14)
- GNU C Library: Shared libraries
also a virtual package provided by libc6-udeb
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- dep: libssw0 (= 1.1-1)
- fast SIMD parallelized implementation of the Smith-Waterman algorithm
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- dep: zlib1g (>= 1:1.1.4)
- compression library - runtime
Download ssw-align
| Architecture | Package Size | Installed Size | Files |
|---|---|---|---|
| amd64 | 11.7 kB | 37 kB | [list of files] |