[ aramo ]
[ ソース: mindthegap ]
パッケージ: mindthegap (2.2.3-4)
mindthegap に関するリンク
Trisquel の資源:
mindthegap ソースパッケージをダウンロード:
メンテナ:
Original Maintainers:
- Debian Med Packaging Team (メールアーカイブ)
- Shayan Doust
外部の資源:
- ホームページ [github.com]
類似のパッケージ:
performs detection and assembly of DNA insertion variants in NGS read datasets
Designed to call insertions of any size, whether they are novel or duplicated, homozygous or heterozygous in the donor genome. It takes as input a set of reads and a reference genome. It outputs two sets of FASTA sequences: one is the set of breakpoints of detection insertion sites, the other is the set of assembled insertions for each breakpoint. MindTheGap can also be used as a genome assembly finishing tool. It can fill the gaps between a set of input contigs without any a priori on their relative order and orientation. It outputs the results in gfa file.
その他の mindthegap 関連パッケージ
|
|
|
-
- dep: libc6 (>= 2.34)
- GNU C Library: Shared libraries
以下のパッケージによって提供される仮想パッケージでもあります: libc6-udeb
-
- dep: libgatbcore3 (>= 1.4.2+dfsg-7)
- dynamic library of the Genome Analysis Toolbox
-
- dep: libgcc-s1 (>= 3.3.1)
- GCC support library
-
- dep: libhdf5-103-1
- HDF5 C runtime files - serial version
-
- dep: libstdc++6 (>= 11)
- GNU Standard C++ Library v3