Skip to content
Sections
>> Trisquel >> パッケージ >> aramo >> python >> python3-pyani
nabia  ] [  aramo  ]
[ ソース: python-pyani  ]

パッケージ: python3-pyani (0.2.11-1)

Python3 module for average nucleotide identity analyses

Pyani is a Python3 module and script that provides support for calculating average nucleotide identity (ANI) and related measures for whole genome comparisons, and rendering relevant graphical summary output. Where available, it takes advantage of multicore systems, and can integrate with SGE/OGE-type job schedulers for the sequence comparisons.

その他の python3-pyani 関連パッケージ

  • 依存
  • 推奨
  • 提案
  • dep: mummer
    Efficient sequence alignment of full genomes
  • dep: ncbi-blast+
    next generation suite of BLAST sequence search tools
  • dep: python3
    interactive high-level object-oriented language (default python3 version)
  • dep: python3-biopython
    Python3 library for bioinformatics
  • dep: python3-matplotlib
    Python based plotting system in a style similar to Matlab (Python 3)
  • dep: python3-pandas
    data structures for "relational" or "labeled" data
  • dep: python3-scipy
    scientific tools for Python 3
  • dep: python3-seaborn
    statistical visualization library for Python3
  • dep: python3-setuptools
    Python3 Distutils Enhancements

python3-pyani のダウンロード

すべての利用可能アーキテクチャ向けのダウンロード
アーキテクチャ パッケージサイズ インストールサイズ ファイル
armhf 45.1 kB204 kB [ファイル一覧]