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[ ソース: mdtraj  ]

パッケージ: python3-mdtraj (1.9.9-1ubuntu2)

Read, write and analyze MD trajectories in Python

Read, write and analyze MD trajectories with only a few lines of Python code.

MDTraj is a Python library that allows users to manipulate molecular dynamics (MD) trajectories. Features include:

 * Wide MD format support, including pdb, xtc, trr, dcd, binpos,
 netcdf, mdcrd, prmtop, and more.
 * Extremely fast RMSD calculations (4x the speed of the original
 Theobald QCP).
 * Extensive analysis functions including those that compute bonds,
 angles, dihedrals, hydrogen bonds, secondary structure, and NMR
 observables.
 * Lightweight, Pythonic API.

MDTraj includes a command-line application, mdconvert-mdtraj, for converting trajectories between formats.

This package installs the library for Python 3, together with the command line utilities mdconvert-mdtraj and mdinspect.

その他の python3-mdtraj 関連パッケージ

  • 依存
  • 推奨
  • 提案
  • dep: libc6 (>= 2.38)
    GNU C Library: Shared libraries
    以下のパッケージによって提供される仮想パッケージでもあります: libc6-udeb
  • dep: libgcc-s1 (>= 3.3.1)
    GCC support library
  • dep: libgomp1 (>= 4.9)
    GCC OpenMP (GOMP) support library
  • dep: libstdc++6 (>= 13.1)
    GNU Standard C++ Library v3
  • dep: python3
    interactive high-level object-oriented language (default python3 version)
    dep: python3 (<< 3.13)
    dep: python3 (>= 3.12~)
  • dep: python3-astunparse
    AST unparser for Python
  • dep: python3-networkx
    tool to create, manipulate and study complex networks (Python3)
  • dep: python3-numpy (>= 1:1.25.0)
    Fast array facility to the Python language (Python 3)
  • dep: python3-numpy-abi9
    以下のパッケージによって提供される仮想パッケージです: python3-numpy
  • dep: python3-pandas
    data structures for "relational" or "labeled" data
  • dep: python3-pyparsing
    alternative to creating and executing simple grammars - Python 3.x
  • dep: python3-scipy
    scientific tools for Python 3
  • dep: python3-tables
    Hierarchical database for Python3 based on HDF5
  • dep: zlib1g (>= 1:1.2.0)
    compression library - runtime
  • sug: python-mdtraj-doc
    Read, write and analyze MD trajectories in Python (documentation)

python3-mdtraj のダウンロード

すべての利用可能アーキテクチャ向けのダウンロード
アーキテクチャ パッケージサイズ インストールサイズ ファイル
amd64 1,113.5 kB4541 kB [ファイル一覧]
arm64 1,087.1 kB4593 kB [ファイル一覧]