パッケージ: centrifuge (1.0.3~beta-2)
centrifuge に関するリンク
Trisquel の資源:
centrifuge ソースパッケージをダウンロード:
- [centrifuge_1.0.3~beta-2.dsc]
- [centrifuge_1.0.3~beta.orig.tar.gz]
- [centrifuge_1.0.3~beta-2.debian.tar.xz]
メンテナ:
Original Maintainers:
- Debian Med Packaging Team (メールアーカイブ)
- Andreas Tille
外部の資源:
- ホームページ [ccb.jhu.edu]
類似のパッケージ:
rapid and memory-efficient system for classification of DNA sequences
Centrifuge is a very rapid and memory-efficient system for the classification of DNA sequences from microbial samples, with better sensitivity than and comparable accuracy to other leading systems. The system uses a novel indexing scheme based on the Burrows-Wheeler transform (BWT) and the Ferragina-Manzini (FM) index, optimized specifically for the metagenomic classification problem. Centrifuge requires a relatively small index (e.g., 4.3 GB for ~4,100 bacterial genomes) yet provides very fast classification speed, allowing it to process a typical DNA sequencing run within an hour. Together these advances enable timely and accurate analysis of large metagenomics data sets on conventional desktop computers.
その他の centrifuge 関連パッケージ
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- dep: hisat2
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- dep: libc6 (>= 2.14)
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以下のパッケージによって提供される仮想パッケージでもあります: libc6-udeb
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- dep: libgcc1 (>= 1:3.0)
- GCC support library
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- dep: libstdc++6 (>= 5.2)
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