パッケージ: python3-presto (0.5.13-2)
python3-presto に関するリンク
Trisquel の資源:
presto ソースパッケージをダウンロード:
メンテナ:
Original Maintainers:
- Debian Python Modules Team (メールアーカイブ)
- Steffen Moeller
外部の資源:
- ホームページ [presto.readthedocs.io]
類似のパッケージ:
toolkit for processing B and T cell sequences
pRESTO is a toolkit for processing raw reads from high-throughput sequencing of B cell and T cell repertoires.
Dramatic improvements in high-throughput sequencing technologies now enable large-scale characterization of lymphocyte repertoires, defined as the collection of trans-membrane antigen-receptor proteins located on the surface of B cells and T cells. The REpertoire Sequencing TOolkit (pRESTO) is composed of a suite of utilities to handle all stages of sequence processing prior to germline segment assignment. pRESTO is designed to handle either single reads or paired-end reads. It includes features for quality control, primer masking, annotation of reads with sequence embedded barcodes, generation of unique molecular identifier (UMI) consensus sequences, assembly of paired-end reads and identification of duplicate sequences. Numerous options for sequence sorting, sampling and conversion operations are also included.
その他の python3-presto 関連パッケージ
|
|
|
-
- dep: python3
- interactive high-level object-oriented language (default python3 version)
-
- dep: python3-biopython (>= 1.65)
- Python3 library for bioinformatics
-
- dep: python3-numpy
- Fast array facility to the Python 3 language
-
- dep: python3-pandas (>= 0.15)
- data structures for "relational" or "labeled" data
-
- dep: python3-scipy
- scientific tools for Python 3