[ Source: khmer ]
Package: khmer (2.1.2+dfsg-6build2)
Links for khmer
Trisquel Resources:
Download Source Package khmer:
- [khmer_2.1.2+dfsg-6build2.dsc]
- [khmer_2.1.2+dfsg.orig.tar.gz]
- [khmer_2.1.2+dfsg-6build2.debian.tar.xz]
Maintainer:
Original Maintainers:
- Debian Med Packaging Team (Mail Archive)
- Michael R. Crusoe
- Kevin Murray
External Resources:
- Homepage [khmer.readthedocs.org]
Similar packages:
in-memory DNA sequence kmer counting, filtering & graph traversal
khmer is a library and suite of command line tools for working with DNA sequence. It is primarily aimed at short-read sequencing data such as that produced by the Illumina platform. khmer takes a k-mer-centric approach to sequence analysis, hence the name.
Other Packages Related to khmer
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- dep: cython3 (>= 0.26.1)
- C-Extensions for Python 3
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- dep: khmer-common
- common files for the khmer project tools
-
- dep: libbz2-1.0
- high-quality block-sorting file compressor library - runtime
-
- dep: libc6 (>= 2.29)
- GNU C Library: Shared libraries
also a virtual package provided by libc6-udeb
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- dep: libgcc-s1 (>= 3.4)
- GCC support library
-
- dep: libgomp1 (>= 4.9)
- GCC OpenMP (GOMP) support library
-
- dep: libstdc++6 (>= 5.2)
- GNU Standard C++ Library v3
-
- dep: python3
- interactive high-level object-oriented language (default python3 version)
- dep: python3 (<< 3.9)
- dep: python3 (>= 3.8~)
-
- dep: python3-bz2file
- Python3 library for reading and writing bzip2-compressed files
-
- dep: python3-screed (>= 1.0)
- short nucleotide read sequence utils in Python 3
-
- dep: zlib1g (>= 1:1.2.3.4)
- compression library - runtime
Download khmer
| Architecture | Package Size | Installed Size | Files |
|---|---|---|---|
| amd64 | 6,565.8 kB | 29832 kB | [list of files] |