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[ Source: plip  ]

Package: plip (1.4.4~b+dfsg-1)

Links for plip

plip

Trisquel Resources:

Download Source Package plip:

Maintainer:

Original Maintainers:

  • Debian Med Packaging Team (Mail Archive)
  • Alexandre Mestiashvili

External Resources:

  • Homepage [projects.biotec.tu-dresden.de]

Similar packages:

fully automated protein-ligand interaction profiler

The Protein-Ligand Interaction Profiler (PLIP) is a tool to analyze and visualize protein-ligand interactions in PDB files.

Features include: 

 * Detection of eight different types of noncovalent interactions
 * Automatic detection of relevant ligands in a PDB file
 * Direct download of PDB structures from wwPDB server if valid
   PDB ID is given
 * Processing of custom PDB files containing protein-ligand complexes
   (e.g. from docking)
 * No need for special preparation of a PDB file, works out of the box
 * Atom-level interaction reports in rST and XML formats for easy parsing
 * Generation of PyMOL session files (.pse) for each pairing, enabling easy
   preparation of images for publications and talks
 * Rendering of preview image for each ligand and its interactions
   with the protein

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  • dep: python3-openbabel
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  • sug: pymol
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Download plip

Download for all available architectures
Architecture Package Size Installed Size Files
all 64.5 kB301 kB [list of files]