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[ Source: cyvcf2 ]
Package: python3-cyvcf2 (0.11.6-1)
Links for python3-cyvcf2
Trisquel Resources:
Download Source Package cyvcf2:
Maintainer:
Original Maintainers:
- Debian Med Packaging Team (Mail Archive)
- Steffen Moeller
- Liubov Chuprikova
External Resources:
- Homepage [github.com]
Similar packages:
VCF parser based on htslib (Python 3)
This modules allows fast parsing of VCF and BCF including region-queries with Python. This is essential for efficient analyses of nucleotide variation with Python on high-throughput sequencing data.
cyvcf2 is a cython wrapper around htslib. Attributes like variant.gt_ref_depths return a numpy array directly so they are immediately ready for downstream use.
This package installs the library for Python 3.
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- dep: libc6 (>= 2.14) [amd64]
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also a virtual package provided by libc6-udeb
- dep: libc6 (>= 2.7) [armhf]
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- dep: libhts3 (>= 1.10)
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Download python3-cyvcf2
| Architecture | Package Size | Installed Size | Files |
|---|---|---|---|
| amd64 | 829.5 kB | 4700 kB | [list of files] |
| armhf | 797.1 kB | 4404 kB | [list of files] |