[ Source: norsnet ]
Package: norsnet (1.0.17-6)
Links for norsnet
Trisquel Resources:
Download Source Package norsnet:
Maintainer:
Original Maintainers:
- Debian Med Packaging Team (Mail Archive)
- Christian Mertes
- Laszlo Kajan
- Andreas Tille
External Resources:
- Homepage [www.rostlab.org]
Similar packages:
tool to identify unstructured loops in proteins
NORSnet can distinguish between very long contiguous segments with non-regular secondary structure (NORS regions) and well-folded proteins.
NORSnet was trained on predicted information rather than on experimental data. This allows NORSnet to reach into regions in sequence space that are not covered by specialized disorder predictors. One disadvantage of this approach is that it is not optimal for the identification of the "average" disordered region.
NORSnet takes the following input, further described on norsnet(1):
* a protein sequence in a FASTA file * secondary structure and solvent accessibility prediction by prof(1) * an HSSP file * flexible/rigid residues prediction by profbval(1)
Other Packages Related to norsnet
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- dep: profnet-norsnet
- neural network architecture for norsnet
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- rec: blast2
- transitional dummy package to ncbi-blast+-legacy
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- rec: librg-utils-perl
- parsers and format conversion utilities used by (e.g.) profphd
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- rec: profbval
- predictor of flexible/rigid protein residues from sequence
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- rec: profphd
- Package not available
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- sug: pp-popularity-contest
- PredictProtein popularity contest
Download norsnet
| Architecture | Package Size | Installed Size | Files |
|---|---|---|---|
| all | 42.1 kB | 213 kB | [list of files] |