Package: plink1.9 (1.90~b6.16-200217-1)
Links for plink1.9
Trisquel Resources:
Download Source Package plink1.9:
- [plink1.9_1.90~b6.16-200217-1.dsc]
- [plink1.9_1.90~b6.16-200217.orig.tar.xz]
- [plink1.9_1.90~b6.16-200217-1.debian.tar.xz]
Maintainer:
Original Maintainers:
- Debian Med Packaging Team (Mail Archive)
- Dylan Aïssi
External Resources:
- Homepage [www.cog-genomics.org]
Similar packages:
whole-genome association analysis toolset
plink expects as input the data from SNP (single nucleotide polymorphism) chips of many individuals and their phenotypical description of a disease. It finds associations of single or pairs of DNA variations with a phenotype and can retrieve SNP annotation from an online source.
SNPs can evaluated individually or as pairs for their association with the disease phenotypes. The joint investigation of copy number variations is supported. A variety of statistical tests have been implemented.
plink1.9 is a comprehensive update of plink with new algorithms and new methods, faster and less memory consumer than the first plink.
Please note: The executable was renamed to plink1.9 because of a name clash. Please read more about this in /usr/share/doc/plink1.9/README.Debian.
Other Packages Related to plink1.9
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- dep: libblas3
- Basic Linear Algebra Reference implementations, shared library
- or libblas.so.3
- virtual package provided by libatlas3-base, libblas3, libblis3-openmp, libblis3-pthread, libblis3-serial, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial
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- dep: libc6 (>= 2.29)
- GNU C Library: Shared libraries
also a virtual package provided by libc6-udeb
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- dep: libgcc-s1 (>= 3.0) [amd64]
- GCC support library
- dep: libgcc-s1 (>= 3.5) [armhf]
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- dep: liblapack3
- Library of linear algebra routines 3 - shared version
- or liblapack.so.3
- virtual package provided by libatlas3-base, liblapack3, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial
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- dep: libstdc++6 (>= 5)
- GNU Standard C++ Library v3
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- dep: zlib1g (>= 1:1.2.6)
- compression library - runtime
Download plink1.9
| Architecture | Package Size | Installed Size | Files |
|---|---|---|---|
| amd64 | 848.4 kB | 2134 kB | [list of files] |
| armhf | 763.8 kB | 1461 kB | [list of files] |