Skip to content
Sections
>> Trisquel >> Pakketten >> aramo >> gnu-r >> r-bioc-pwmenrich
aramo  ]
[ Bron: r-bioc-pwmenrich  ]

Pakket: r-bioc-pwmenrich (4.30.0-1)

PWM enrichment analysis

A toolkit of high-level functions for DNA motif scanning and enrichment analysis built upon Biostrings. The main functionality is PWM enrichment analysis of already known PWMs (e.g. from databases such as MotifDb), but the package also implements high-level functions for PWM scanning and visualisation. The package does not perform "de novo" motif discovery, but is instead focused on using motifs that are either experimentally derived or computationally constructed by other tools.

Andere aan r-bioc-pwmenrich gerelateerde pakketten

  • depends
  • recommends
  • suggests
  • sug: r-bioc-biocstyle
    standard styles for vignettes and other Bioconductor documents
  • sug: r-bioc-bsgenome
    BioConductor infrastructure for Biostrings-based genome data packages
  • sug: r-cran-gtools
    GNU R package with R programming tools by Greg Warnes et al
  • sug: r-cran-knitr
    GNU R package for dynamic report generation using Literate Programming
  • sug: r-cran-testthat
    GNU R testsuite

r-bioc-pwmenrich downloaden

Pakket downloaden voor alle beschikbare platforms
Platform Pakketgrootte Geïnstalleerde grootte Bestanden
all 1.972,2 kB2291 kB [overzicht]