[ Bron: cyvcf2 ]
Pakket: python3-cyvcf2 (0.30.28-1build2)
Verwijzigingen voor python3-cyvcf2
Trisquel bronnen:
Het bronpakket cyvcf2 downloaden:
Beheerder:
Original Maintainers:
- Debian Med Packaging Team (Mailarchief)
- Steffen Moeller
- Liubov Chuprikova
Externe bronnen:
- Homepage [github.com]
Vergelijkbare pakketten:
VCF parser based on htslib (Python 3)
This modules allows fast parsing of VCF and BCF including region-queries with Python. This is essential for efficient analyses of nucleotide variation with Python on high-throughput sequencing data.
cyvcf2 is a cython wrapper around htslib. Attributes like variant.gt_ref_depths return a numpy array directly so they are immediately ready for downstream use.
This package installs the library for Python 3.
Andere aan python3-cyvcf2 gerelateerde pakketten
|
|
|
-
- dep: libc6 (>= 2.14)
- GNU C Library: Shared libraries
Ook een virtueel pakket geboden door: libc6-udeb
-
- dep: libhts3t64 (>= 1.17)
- C library for high-throughput sequencing data formats
-
- dep: python3
- interactive high-level object-oriented language (default python3 version)
- dep: python3 (<< 3.13)
- dep: python3 (>= 3.12~)
-
- dep: python3-click
- Wrapper around optparse for command line utilities - Python 3.x
-
- dep: python3-coloredlogs
- colored terminal output for Python 3's logging module
-
- dep: python3-numpy (>= 1:1.25.0)
- Fast array facility to the Python language (Python 3)
-
- dep: python3-numpy-abi9
- virtueel pakket geboden door python3-numpy