Pakiet: r-bioc-structuralvariantannotation (1.10.1+ds-1)
Odnośniki dla r-bioc-structuralvariantannotation
Zasoby systemu Trisquel:
- Install using apturl
- Entry at directory.fsf.org
- Raporty o błędach
- Changelog
- Informacje nt. praw autorskich
Pobieranie pakietu źródłowego r-bioc-structuralvariantannotation:
- [r-bioc-structuralvariantannotation_1.10.1+ds-1.dsc]
- [r-bioc-structuralvariantannotation_1.10.1+ds.orig.tar.xz]
- [r-bioc-structuralvariantannotation_1.10.1+ds-1.debian.tar.xz]
Opiekun:
Original Maintainers:
- Debian R Packages Maintainers
- Steffen Moeller
Zasoby zewnętrzne:
- Strona internetowa [bioconductor.org]
Podobne pakiety:
Variant annotations for structural variants
StructuralVariantAnnotation contains useful helper functions for dealing with structural variants in VCF format. The packages contains functions for parsing VCFs from a number of popular callers as well as functions for dealing with breakpoints involving two separate genomic loci encoded as GRanges objects.
Inne pakiety związane z r-bioc-structuralvariantannotation
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- dep: r-api-4.0
- pakiet wirtualny udostępniany przez r-base-core
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- dep: r-api-bioc-3.14
- pakiet wirtualny udostępniany przez r-bioc-biocgenerics
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- dep: r-base-core (>= 4.1.2-1ubuntu1)
- GNU R core of statistical computation and graphics system
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- dep: r-bioc-biocgenerics
- generic functions for Bioconductor
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- dep: r-bioc-biostrings
- GNU R string objects representing biological sequences
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- dep: r-bioc-genomeinfodb
- BioConductor utilities for manipulating chromosome identifiers
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- dep: r-bioc-genomicfeatures
- GNU R tools for making and manipulating transcript centric annotations
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- dep: r-bioc-genomicranges
- BioConductor representation and manipulation of genomic intervals
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- dep: r-bioc-iranges
- GNU R low-level containers for storing sets of integer ranges
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- dep: r-bioc-rtracklayer
- GNU R interface to genome browsers and their annotation tracks
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- dep: r-bioc-s4vectors
- BioConductor S4 implementation of vectors and lists
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- dep: r-bioc-summarizedexperiment
- BioConductor assay container
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- dep: r-bioc-variantannotation
- BioConductor annotation of genetic variants
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- dep: r-cran-assertthat
- GNU R easy pre and post assertions
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- dep: r-cran-dplyr
- GNU R grammar of data manipulation
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- dep: r-cran-rlang
- Functions for Base Types and Core R and 'Tidyverse' Features
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- dep: r-cran-stringr
- Make it easier to work with strings
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- sug: r-bioc-biovizbase
- GNU R basic graphic utilities for visualization of genomic data
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- sug: r-bioc-ggbio
- Visualization tools for genomic data
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- sug: r-cran-devtools
- Tools to Make Developing R Packages Easier
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- sug: r-cran-ggplot2
- implementation of the Grammar of Graphics
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- sug: r-cran-knitr
- GNU R package for dynamic report generation using Literate Programming
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- sug: r-cran-rmarkdown
- convert R markdown documents into a variety of formats
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- sug: r-cran-roxygen2
- in-line documentation for GNU R
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- sug: r-cran-testthat (>= 2.1.0)
- GNU R testsuite
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- sug: r-cran-tidyverse
- Easily Install and Load the 'Tidyverse'
Pobieranie r-bioc-structuralvariantannotation
Architektura | Rozmiar pakietu | Rozmiar po instalacji | Pliki |
---|---|---|---|
all | 405,7 KiB | 1297 KiB | [lista plików] |