Pakiet: python3-pauvre (0.2.3-1)
Odnośniki dla python3-pauvre
Zasoby systemu Trisquel:
- Install using apturl
- Entry at directory.fsf.org
- Raporty o błędach
- Changelog
- Informacje nt. praw autorskich
Pobieranie pakietu źródłowego python-pauvre:
Opiekun:
Original Maintainers:
- Debian Med Packaging Team (Archiwum e-mail)
- Andreas Tille
- Étienne Mollier
Zasoby zewnętrzne:
- Strona internetowa [github.com]
Podobne pakiety:
QC and genome browser plotting Oxford Nanopore and PacBio long reads
Pauvre is a plotting package designed for nanopore and PacBio long reads.
This package currently hosts four scripts for plotting and/or printing stats.
pauvre marginplot Takes a fastq file as input and outputs a marginal histogram with a heatmap. pauvre stats Takes a fastq file as input and prints out a table of stats, including how many basepairs/reads there are for a length/mean quality cutoff. This is also automagically called when using pauvre marginplot pauvre redwood Method of representing circular genomes. A redwood plot contains long reads as "rings" on the inside, a gene annotation "cambrium/phloem", and a RNAseq "bark". The input is .bam files for the long reads and RNAseq data, and a .gff file for the annotation. pauvre synteny Makes a synteny plot of circular genomes. Finds the most parsimonius rotation to display the synteny of all the input genomes with the fewest crossings-over. Input is one .gff file per circular genome and one directory of gene alignments.
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Pobieranie python3-pauvre
Architektura | Rozmiar pakietu | Rozmiar po instalacji | Pliki |
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all | 51,1 KiB | 278 KiB | [lista plików] |