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[ Pakiet źródłowy: maq  ]

Pakiet: maq (0.7.1-7)

maps short fixed-length polymorphic DNA sequence reads to reference sequences

Maq (short for Mapping and Assembly with Quality) builds mapping assemblies from short reads generated by the next-generation sequencing machines. It was particularly designed for Illumina-Solexa 1G Genetic Analyzer, and has a preliminary functionality to handle ABI SOLiD data. Maq is previously known as mapass2.

Developmemt of Maq stopped in 2008. Its successors are BWA and SAMtools.

Inne pakiety związane z maq

  • wymaga
  • poleca
  • sugeruje
  • dep: libc6 (>= 2.23)
    GNU C Library: Shared libraries
    również pakiet wirtualny udostępniany przez libc6-udeb
  • dep: libgcc1 (>= 1:4.2)
    GCC support library
  • dep: libstdc++6 (>= 5)
    GNU Standard C++ Library v3
  • dep: zlib1g (>= 1:1.2.3.3)
    compression library - runtime
  • sug: bwa
    Burrows-Wheeler Aligner
  • sug: samtools
    processing sequence alignments in SAM and BAM formats

Pobieranie maq

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