[ Pakiet źródłowy: prime-phylo ]
Pakiet: prime-phylo (1.0.11-4build2)
Odnośniki dla prime-phylo
Zasoby systemu Trisquel:
- Install using apturl
- Entry at directory.fsf.org
- Raporty o błędach
- Changelog
- Informacje nt. praw autorskich
Pobieranie pakietu źródłowego prime-phylo:
- [prime-phylo_1.0.11-4build2.dsc]
- [prime-phylo_1.0.11.orig.tar.gz]
- [prime-phylo_1.0.11-4build2.debian.tar.xz]
Opiekun:
Original Maintainers:
- Debian Med Packaging Team (Archiwum e-mail)
- Erik Sjolund
- Andreas Tille
Zasoby zewnętrzne:
- Strona internetowa [prime.sbc.su.se]
Podobne pakiety:
bayesian estimation of gene trees taking the species tree into account
PrIME (Probabilistic Integrated Models of Evolution) is a package supporting inference of evolutionary parameters in a Bayesian framework using Markov chain Monte Carlo simulation. A distinguishing feature of PrIME is that the species tree is taken into account when analyzing gene trees.
The input data to PrIME is a multiple sequence alignment in FASTA format and the output data contains trees in Newick format.
Inne pakiety związane z prime-phylo
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- dep: libblas3
- Basic Linear Algebra Reference implementations, shared library
- lub libblas.so.3
- pakiet wirtualny udostępniany przez libatlas3-base, libblas3, libopenblas-base
-
- dep: libboost-mpi1.62.0
- C++ interface to the Message Passing Interface (MPI)
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- dep: libboost-serialization1.62.0
- serialization library for C++
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- dep: libc6 (>= 2.23)
- GNU C Library: Shared libraries
również pakiet wirtualny udostępniany przez libc6-udeb
-
- dep: libgcc1 (>= 1:4.0)
- GCC support library
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- dep: liblapack3
- Library of linear algebra routines 3 - shared version
- lub liblapack.so.3
- pakiet wirtualny udostępniany przez libatlas3-base, liblapack3, libopenblas-base
-
- dep: libopenmpi2
- high performance message passing library -- shared library
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- dep: libstdc++6 (>= 5.2)
- GNU Standard C++ Library v3
-
- dep: libxml2 (>= 2.7.4)
- GNOME XML library
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- dep: perl
- Larry Wall's Practical Extraction and Report Language
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- sug: mafft
- Multiple alignment program for amino acid or nucleotide sequences
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- sug: mrbayes
- Bayesian Inference of Phylogeny
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- sug: muscle
- Multiple alignment program of protein sequences
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- sug: njplot
- phylogenetic tree drawing program
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- sug: phyml
- Phylogenetic estimation using Maximum Likelihood
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- sug: probalign
- multiple sequence alignment using partition function posterior probabilities
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- sug: python-biopython
- Python library for bioinformatics (implemented in Python 2)
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- sug: raxml
- Randomized Axelerated Maximum Likelihood of phylogenetic trees
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- sug: treeviewx
- Displays and prints phylogenetic trees
Pobieranie prime-phylo
| Architektura | Rozmiar pakietu | Rozmiar po instalacji | Pliki |
|---|---|---|---|
| amd64 | 832,3 KiB | 3390 KiB | [lista plików] |
| i386 | 902,1 KiB | 3371 KiB | [lista plików] |