Pakiet: bbmap (38.79+dfsg-1)
Odnośniki dla bbmap
Zasoby systemu Trisquel:
- Install using apturl
- Entry at directory.fsf.org
- Raporty o błędach
- Changelog
- Informacje nt. praw autorskich
Pobieranie pakietu źródłowego bbmap:
Opiekun:
Original Maintainers:
- Debian Med Packaging Team (Archiwum e-mail)
- Andreas Tille
Zasoby zewnętrzne:
- Strona internetowa [sourceforge.net]
Podobne pakiety:
short read aligner and other bioinformatic tools
BBMap: Short read aligner for DNA and RNA-seq data. Capable of handling arbitrarily large genomes with millions of scaffolds. Handles Illumina, PacBio, 454, and other reads; very high sensitivity and tolerant of errors and numerous large indels.
BBMap is multithreaded as well as the other tools bundled into this package for instance:
BBNorm: Kmer-based error-correction and normalization tool.
Dedupe: Simplifies assemblies by removing duplicate or contained subsequences that share a target percent identity.
Reformat: Reformats reads between fasta/fastq/scarf/fasta+qual/sam, interleaved/paired, and ASCII-33/64, at over 500 MB/s.
BBDuk: Filters, trims, or masks reads with kmer matches to an artifact/contaminant file.
Inne pakiety związane z bbmap
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- dep: libmpj-java
- Java library for parallel applications for multicore processors and clusters
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- rec: pigz
- Parallel Implementation of GZip
Pobieranie bbmap
Architektura | Rozmiar pakietu | Rozmiar po instalacji | Pliki |
---|---|---|---|
all | 5 097,0 KiB | 5932 KiB | [lista plików] |