Pakiet: libtfbs-perl (0.7.1-3)
Odnośniki dla libtfbs-perl
Zasoby systemu Trisquel:
- Install using apturl
- Entry at directory.fsf.org
- Raporty o błędach
- Changelog
- Informacje nt. praw autorskich
Pobieranie pakietu źródłowego libtfbs-perl:
Opiekun:
Original Maintainers:
- Debian Med Packaging Team (Archiwum e-mail)
- Steffen Moeller
- Charles Plessy
- Andreas Tille
Zasoby zewnętrzne:
- Strona internetowa [tfbs.genereg.net]
Podobne pakiety:
scanning DNA sequence with a position weight matrix
The TFBS perl modules comprise a set of routines to interact with the Transfac and Jaspar databases that describe a special family of proteins, the transcription factors. These bind to genomic DNA to initiate (or prevent) the readout of a gene. Once multiple binding sites are known for a transcription factor, these are gathered in a single file and are aligned in order to find position-specific characteristica that might be used to predict such binding events in novel DNA sequences.
If you use TFBS in your work, please cite "Lenhard B., Wasserman W.W. (2002) TFBS: Computational framework for transcription factor binding site analysis. Bioinformatics 18:1135-1136".
Note: the TFBS perl module is no longer under active development. All the functionality can be found in the TFBSTools Bioconductor package; users are highly encouraged to switch. <http://bioconductor.org/packages/TFBSTools/>
Inne pakiety związane z libtfbs-perl
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- dep: bioperl
- Perl tools for computational molecular biology
-
- dep: libc6 (>= 2.14)
- GNU C Library: Shared libraries
również pakiet wirtualny udostępniany przez libc6-udeb
-
- dep: libdbi-perl
- Perl Database Interface (DBI)
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- dep: libwww-perl
- simple and consistent interface to the world-wide web
-
- dep: pdl (>= 1:2.019-5build2)
- perl data language: Perl extensions for numerics
-
- dep: perl (>= 5.30.0-8)
- Larry Wall's Practical Extraction and Report Language
-
- dep: perlapi-5.30.0
- pakiet wirtualny udostępniany przez perl-base
-
- rec: libgd-gd2-perl
- pakiet wirtualny udostępniany przez libgd-perl
- lub libgd-gd2-noxpm-perl
- pakiet wirtualny udostępniany przez libgd-perl
Pobieranie libtfbs-perl
| Architektura | Rozmiar pakietu | Rozmiar po instalacji | Pliki |
|---|---|---|---|
| amd64 | 225,3 KiB | 988 KiB | [lista plików] |