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[ Pakiet źródłowy: optimir ]
Pakiet: optimir (1.0-2)
Odnośniki dla optimir
Zasoby systemu Trisquel:
- Install using apturl
- Entry at directory.fsf.org
- Raporty o błędach
- Changelog
- Informacje nt. praw autorskich
Pobieranie pakietu źródłowego optimir:
Opiekun:
Original Maintainers:
- Debian Med Packaging Team (Archiwum e-mail)
- Dylan Aïssi
Zasoby zewnętrzne:
- Strona internetowa [github.com]
Podobne pakiety:
Integrating genetic variations in miRNA alignment
OptimiR is a miRSeq data alignment workflow. It integrates genetic information to assess the impact of variants on miRNA expression.
OptimiR: A bioinformatics pipeline designed to detect and quantify miRNAs, isomiRs and polymiRs from miRSeq data, & study the impact of genetic variations on polymiRs' expression.
Inne pakiety związane z optimir
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- dep: bowtie2
- ultrafast memory-efficient short read aligner
-
- dep: cutadapt
- Clean biological sequences from high-throughput sequencing reads
-
- dep: python3
- interactive high-level object-oriented language (default python3 version)
-
- dep: python3-biopython
- Python3 library for bioinformatics
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- dep: python3-pysam
- interface for the SAM/BAM sequence alignment and mapping format (Python 3)
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- dep: samtools
- processing sequence alignments in SAM, BAM and CRAM formats
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- rec: r-cran-ggplot2
- implementation of the Grammar of Graphics
-
- rec: r-cran-gridextra
- GNU R package with extensions for the grid package
Pobieranie optimir
| Architektura | Rozmiar pakietu | Rozmiar po instalacji | Pliki |
|---|---|---|---|
| all | 1 003,8 KiB | 7404 KiB | [lista plików] |