Пакет: libjellyfish-perl (2.3.0-12ubuntu2)
Ссылки для libjellyfish-perl
Ресурсы Trisquel:
Исходный код jellyfish:
- [jellyfish_2.3.0-12ubuntu2.dsc]
- [jellyfish_2.3.0.orig.tar.gz]
- [jellyfish_2.3.0-12ubuntu2.debian.tar.xz]
Сопровождающий:
Original Maintainers:
- Debian Med Packaging Team (Почтовый архив)
- Shaun Jackman
- Andreas Tille
- Michael R. Crusoe
- Étienne Mollier
Внешние ресурсы:
- Сайт [github.com]
Подобные пакеты:
count k-mers in DNA sequences (Perl bindings of jellyfish)
JELLYFISH is a tool for fast, memory-efficient counting of k-mers in DNA. A k-mer is a substring of length k, and counting the occurrences of all such substrings is a central step in many analyses of DNA sequence. JELLYFISH can count k-mers using an order of magnitude less memory and an order of magnitude faster than other k-mer counting packages by using an efficient encoding of a hash table and by exploiting the "compare-and-swap" CPU instruction to increase parallelism.
JELLYFISH is a command-line program that reads FASTA and multi-FASTA files containing DNA sequences. It outputs its k-mer counts in an binary format, which can be translated into a human-readable text format using the "jellyfish dump" command.
This package contains the Perl bindings of jellyfish.
Другие пакеты, относящиеся к libjellyfish-perl
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- dep: libc6 (>= 2.34)
- GNU C Library: Shared libraries
также виртуальный пакет, предоставляемый libc6-udeb
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- dep: libgcc-s1 (>= 3.3.1) [не armhf]
- GCC support library
- dep: libgcc-s1 (>= 3.5) [armhf]
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- dep: perl
- Larry Wall's Practical Extraction and Report Language
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- dep: perlapi-5.34.0
- виртуальный пакет, предоставляемый perl-base
Загрузка libjellyfish-perl
| Архитектура | Размер пакета | В установленном виде | Файлы |
|---|---|---|---|
| amd64 | 54,7 Кб | 169 Кб | [список файлов] |
| arm64 | 51,9 Кб | 157 Кб | [список файлов] |
| armhf | 59,3 Кб | 139 Кб | [список файлов] |
| ppc64el | 65,0 Кб | 229 Кб | [список файлов] |