Пакет: python3-pairix (0.3.7-5build1)
Ссылки для python3-pairix
Ресурсы Trisquel:
Исходный код python-pairix:
- [python-pairix_0.3.7-5build1.dsc]
- [python-pairix_0.3.7.orig.tar.gz]
- [python-pairix_0.3.7-5build1.debian.tar.xz]
Сопровождающий:
Original Maintainers:
- Debian Med Packaging Team (Почтовый архив)
- Andreas Tille
Внешние ресурсы:
- Сайт [github.com]
Подобные пакеты:
1D/2D indexing and querying with a pair of genomic coordinates
Pairix is a tool for indexing and querying on a block-compressed text file containing pairs of genomic coordinates.
Pairix is a stand-alone C program that was written on top of tabix as a tool for the 4DN-standard pairs file format describing Hi-C data: pairs_format_specification.md
However, Pairix can be used as a generic tool for indexing and querying any bgzipped text file containing genomic coordinates, for either 2D- or 1D- indexing and querying.
For example: given the custom text file below, you want to extract specific lines from the Pairs file further below. An awk command would read the Pairs file from beginning to end. Pairix creates an index and uses it to access the file from a relevant position by taking advantage of bgzf compression, allowing for a fast query on large files.
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Загрузка python3-pairix
Архитектура | Размер пакета | В установленном виде | Файлы |
---|---|---|---|
amd64 | 43,4 Кб | 116 Кб | [список файлов] |
arm64 | 42,5 Кб | 112 Кб | [список файлов] |
armhf | 37,4 Кб | 82 Кб | [список файлов] |
ppc64el | 53,8 Кб | 152 Кб | [список файлов] |