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[ Источник: r-bioc-bitseq ]
Пакет: r-bioc-bitseq (1.38.0+dfsg-1)
Ссылки для r-bioc-bitseq
Ресурсы Trisquel:
Исходный код r-bioc-bitseq:
- [r-bioc-bitseq_1.38.0+dfsg-1.dsc]
- [r-bioc-bitseq_1.38.0+dfsg.orig.tar.xz]
- [r-bioc-bitseq_1.38.0+dfsg-1.debian.tar.xz]
Сопровождающий:
Original Maintainers:
- Debian R Packages Maintainers
- Andreas Tille
Внешние ресурсы:
- Сайт [bioconductor.org]
Подобные пакеты:
transcript expression inference and analysis for RNA-seq data
The BitSeq package is targeted for transcript expression analysis and differential expression analysis of RNA-seq data in two stage process. In the first stage it uses Bayesian inference methodology to infer expression of individual transcripts from individual RNA-seq experiments. The second stage of BitSeq embraces the differential expression analysis of transcript expression. Providing expression estimates from replicates of multiple conditions, Log-Normal model of the estimates is used for inferring the condition mean transcript expression and ranking the transcripts based on the likelihood of differential expression.
Другие пакеты, относящиеся к r-bioc-bitseq
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- dep: libc6 (>= 2.34)
- GNU C Library: Shared libraries
также виртуальный пакет, предоставляемый libc6-udeb
-
- dep: libcurl4 (>= 7.18.0)
- easy-to-use client-side URL transfer library (OpenSSL flavour)
-
- dep: libgcc-s1 (>= 3.0) [amd64]
- GCC support library
- dep: libgcc-s1 (>= 3.4.4) [ppc64el]
- dep: libgcc-s1 (>= 3.5) [armhf]
- dep: libgcc-s1 (>= 4.2) [arm64]
-
- dep: libgomp1 (>= 6)
- GCC OpenMP (GOMP) support library
-
- dep: libstdc++6 (>= 11)
- GNU Standard C++ Library v3
-
- dep: r-api-4.0
- виртуальный пакет, предоставляемый r-base-core
-
- dep: r-api-bioc-3.14
- виртуальный пакет, предоставляемый r-bioc-biocgenerics
-
- dep: r-base-core (>= 4.1.2-1ubuntu1)
- GNU R core of statistical computation and graphics system
-
- dep: r-bioc-iranges
- GNU R low-level containers for storing sets of integer ranges
-
- dep: r-bioc-rhtslib (>= 1.15.5)
- HTSlib high-throughput sequencing library as GNU R package
-
- dep: r-bioc-rsamtools (>= 1.99.3)
- GNU R binary alignment (BAM), variant call (BCF), or tabix file import
-
- dep: r-bioc-s4vectors
- BioConductor S4 implementation of vectors and lists
-
- sug: r-bioc-biocstyle
- standard styles for vignettes and other Bioconductor documents
Загрузка r-bioc-bitseq
| Архитектура | Размер пакета | В установленном виде | Файлы |
|---|---|---|---|
| amd64 | 1 162,1 Кб | 5975 Кб | [список файлов] |
| arm64 | 1 145,5 Кб | 5867 Кб | [список файлов] |
| armhf | 1 110,7 Кб | 5581 Кб | [список файлов] |
| ppc64el | 1 269,9 Кб | 6379 Кб | [список файлов] |