Пакет: bowtie2 (2.3.4.1-1)
Ссылки для bowtie2
Ресурсы Trisquel:
Исходный код bowtie2:
Сопровождающий:
Original Maintainers:
- Debian Med Packaging Team (Почтовый архив)
- Alexandre Mestiashvili
- Andreas Tille
Внешние ресурсы:
- Сайт [bowtie-bio.sourceforge.net]
Подобные пакеты:
ultrafast memory-efficient short read aligner
is an ultrafast and memory-efficient tool for aligning sequencing reads to long reference sequences. It is particularly good at aligning reads of about 50 up to 100s or 1,000s of characters, and particularly good at aligning to relatively long (e.g. mammalian) genomes.
Bowtie 2 indexes the genome with an FM Index to keep its memory footprint small: for the human genome, its memory footprint is typically around 3.2 GB. Bowtie 2 supports gapped, local, and paired-end alignment modes
Другие пакеты, относящиеся к bowtie2
|
|
|
-
- dep: libc6 (>= 2.14)
- GNU C Library: Shared libraries
также виртуальный пакет, предоставляемый libc6-udeb
-
- dep: libgcc1 (>= 1:3.0)
- GCC support library
-
- dep: libstdc++6 (>= 5.2)
- GNU Standard C++ Library v3
-
- dep: libtbb2
- parallelism library for C++ - runtime files
-
- dep: python
- interactive high-level object-oriented language (default version)
-
- dep: zlib1g (>= 1:1.2.6)
- compression library - runtime
-
- sug: bowtie2-examples
- Examples for bowtie2
Загрузка bowtie2
Архитектура | Размер пакета | В установленном виде | Файлы |
---|---|---|---|
amd64 | 1 146,9 Кб | 4980 Кб | [список файлов] |