[ Источник: pbsuite ]
Пакет: pbhoney (15.8.24+dfsg-2)
Ссылки для pbhoney
Ресурсы Trisquel:
Исходный код pbsuite:
- [pbsuite_15.8.24+dfsg-2.dsc]
- [pbsuite_15.8.24+dfsg.orig.tar.xz]
- [pbsuite_15.8.24+dfsg-2.debian.tar.xz]
Сопровождающий:
Original Maintainers:
- Debian Med Packaging Team (Почтовый архив)
- Afif Elghraoui
Внешние ресурсы:
- Сайт [sourceforge.net]
Подобные пакеты:
genomic structural variation discovery
PBHoney is an implementation of two variant-identification approaches designed to exploit the high mappability of long reads (i.e., greater than 10,000 bp). PBHoney considers both intra-read discordance and soft-clipped tails of long reads to identify structural variants.
PBHoney is part of the PBSuite.
Другие пакеты, относящиеся к pbhoney
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- dep: blasr (>= 5.3)
- mapping single-molecule sequencing reads
-
- dep: python
- interactive high-level object-oriented language (default version)
-
- dep: python-h5py (>= 2.0.1)
- general-purpose Python interface to hdf5 (Python 2)
-
- dep: python-intervaltree-bio
- Interval tree convenience classes for genomic data -- Python 2 library
-
- dep: python-networkx
- tool to create, manipulate and study complex networks
-
- dep: python-numpy
- Numerical Python adds a fast array facility to the Python language
-
- dep: python-pbbanana (= 15.8.24+dfsg-2)
- additional utilities for the pbsuite
-
- dep: python-pbsuite-utils (= 15.8.24+dfsg-2)
- software for Pacific Biosciences sequencing data -- Python utilities
-
- dep: python-pysam (>= 0.8.0)
- interface for the SAM/BAM sequence alignment and mapping format (Python 2)
-
- dep: samtools
- processing sequence alignments in SAM and BAM formats
-
- rec: pbdagcon
- sequence consensus using directed acyclic graphs
Загрузка pbhoney
| Архитектура | Размер пакета | В установленном виде | Файлы |
|---|---|---|---|
| all | 1 276,3 Кб | 2353 Кб | [список файлов] |