Skip to content
Sections
>> Trisquel >> Пакеты >> etiona >> science >> glam2
etiona  ] [  nabia  ] [  aramo  ]
[ Источник: glam2  ]

Пакет: glam2 (1064-4)

Ссылки для glam2

glam2

Ресурсы Trisquel:

Исходный код glam2:

Сопровождающий:

Original Maintainers:

Внешние ресурсы:

Подобные пакеты:

gapped protein motifs from unaligned sequences

GLAM2 is a software package for finding motifs in sequences, typically amino-acid or nucleotide sequences. A motif is a re-occurring sequence pattern: typical examples are the TATA box and the CAAX prenylation motif. The main innovation of GLAM2 is that it allows insertions and deletions in motifs.

This package includes programs for discovering motifs shared by a set of sequences and finding matches to these motifs in a sequence database, as well as utilities for converting glam2 motifs to standard alignment formats, masking glam2 motifs out of sequences so that weaker motifs can be found, and removing highly similar members of a set of sequences.

The package includes these programs:

 glam2:       discovering motifs shared by a set of sequences;
 glam2scan:   finding matches, in a sequence database, to a motif discovered
              by glam2;
 glam2format: converting glam2 motifs to  standard alignment formats;
 glam2mask:   masking glam2 motifs out of sequences, so that weaker motifs
              can be found;
 glam2-purge: removing highly similar members of a set of sequences.

In this binary package, the fast Fourier algorithm (FFT) was enabled for the glam2 program.

Другие пакеты, относящиеся к glam2

  • зависимости
  • рекомендации
  • предложения
  • dep: libc6 (>= 2.14) [amd64]
    GNU C Library: Shared libraries
    также виртуальный пакет, предоставляемый libc6-udeb
    dep: libc6 (>= 2.7) [i386]
  • dep: libfftw3-double3 (>= 3.3.5)
    Library for computing Fast Fourier Transforms - Double precision

Загрузка glam2

Загрузить для всех доступных архитектур
Архитектура Размер пакета В установленном виде Файлы
amd64 234,3 Кб503 Кб [список файлов]
i386 236,3 Кб506 Кб [список файлов]