[ Источник: iqtree ]
Пакет: iqtree (1.6.1+dfsg-1)
Ссылки для iqtree
Ресурсы Trisquel:
Исходный код iqtree:
Сопровождающий:
Original Maintainers:
- Debian Med Packaging Team (Почтовый архив)
- Andreas Tille
- Kevin Murray
Внешние ресурсы:
- Сайт [www.cibiv.at]
Подобные пакеты:
efficient phylogenetic software by maximum likelihood
IQ-TREE is a very efficient maximum likelihood phylogenetic software with following key features among others:
* A novel fast and effective stochastic algorithm to estimate maximum likelihood trees. IQ-TREE outperforms both RAxML and PhyML in terms of likelihood while requiring similar amount of computing time (see Nguyen et al., 2015) * An ultrafast bootstrap approximation to assess branch supports (see Minh et al., 2013). * A wide range of substitution models for binary, DNA, protein, codon, and morphological alignments. * Ultrafast model selection for all data types, 10 to 100 times faster than jModelTest and ProtTest. * Finding best partition scheme like PartitionFinder. * Partitioned models with mixed data types for phylogenomic (multi- gene) alignments, allowing for separate, proportional, or joint branch lengths among genes. * Supporting the phylogenetic likelihod library (PLL) (see Flouri et al., 2014)
Другие пакеты, относящиеся к iqtree
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- dep: libc6 (>= 2.7)
- GNU C Library: Shared libraries
также виртуальный пакет, предоставляемый libc6-udeb
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- dep: libgcc1 (>= 1:4.2)
- GCC support library
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- dep: libgomp1 (>= 4.9)
- GCC OpenMP (GOMP) support library
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- dep: libopenmpi2
- high performance message passing library -- shared library
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- dep: libstdc++6 (>= 5.2)
- GNU Standard C++ Library v3
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- dep: zlib1g (>= 1:1.1.4)
- compression library - runtime
Загрузка iqtree
Архитектура | Размер пакета | В установленном виде | Файлы |
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i386 | 2 445,0 Кб | 14028 Кб | [список файлов] |