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Пакет: r-bioc-dnacopy (1.60.0-1)

Ссылки для r-bioc-dnacopy

r-bioc-dnacopy

Ресурсы Trisquel:

Исходный код r-bioc-dnacopy:

Сопровождающий:

Original Maintainers:

  • Debian R Packages Maintainers
  • Michael R. Crusoe

Внешние ресурсы:

Подобные пакеты:

R package: DNA copy number data analysis

Implements the circular binary segmentation (CBS) algorithm to segment DNA copy number data and identify genomic regions with abnormal copy number.

This package is for analyzing array DNA copy number data, which is usually (but not always) called array Comparative Genomic Hybridization (array CGH) data It implements a methodology for finding change-points in these data which are points after which the (log) test over reference ratios have changed location. This model is that the change-points correspond to positions where the underlying DNA copy number has changed. Therefore, change-points can be used to identify regions of gained and lost copy number. Also provided is a function for making relevant plots of these data.

Другие пакеты, относящиеся к r-bioc-dnacopy

  • зависимости
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  • предложения
  • dep: libc6 (>= 2.29)
    GNU C Library: Shared libraries
    также виртуальный пакет, предоставляемый libc6-udeb
  • dep: libgfortran5 (>= 8)
    Runtime library for GNU Fortran applications
  • dep: r-api-3.5
    виртуальный пакет, предоставляемый r-base-core
  • dep: r-api-bioc-3.10
    виртуальный пакет, предоставляемый r-bioc-biocgenerics
  • dep: r-base-core (>= 3.6.1-7)
    GNU R core of statistical computation and graphics system

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