[ Источник: r-bioc-genomicalignments ]
Пакет: r-bioc-genomicalignments (1.22.1-1)
Ссылки для r-bioc-genomicalignments
Ресурсы Trisquel:
Исходный код r-bioc-genomicalignments:
- [r-bioc-genomicalignments_1.22.1-1.dsc]
- [r-bioc-genomicalignments_1.22.1.orig.tar.gz]
- [r-bioc-genomicalignments_1.22.1-1.debian.tar.xz]
Сопровождающий:
Original Maintainers:
- Debian R Packages Maintainers
- Andreas Tille
Внешние ресурсы:
- Сайт [bioconductor.org]
Подобные пакеты:
BioConductor representation and manipulation of short genomic alignments
This BioConductor package provides efficient containers for storing and manipulating short genomic alignments (typically obtained by aligning short reads to a reference genome). This includes read counting, computing the coverage, junction detection, and working with the nucleotide content of the alignments.
Другие пакеты, относящиеся к r-bioc-genomicalignments
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- dep: libc6 (>= 2.4)
- GNU C Library: Shared libraries
также виртуальный пакет, предоставляемый libc6-udeb
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- dep: r-api-3.5
- виртуальный пакет, предоставляемый r-base-core
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- dep: r-api-bioc-3.10
- виртуальный пакет, предоставляемый r-bioc-biocgenerics
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- dep: r-base-core (>= 3.6.1-7)
- GNU R core of statistical computation and graphics system
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- dep: r-bioc-biocgenerics (>= 0.15.3)
- generic functions for Bioconductor
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- dep: r-bioc-biocparallel
- BioConductor facilities for parallel evaluation
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- dep: r-bioc-biostrings (>= 2.47.6)
- GNU R string objects representing biological sequences
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- dep: r-bioc-genomeinfodb (>= 1.13.1)
- BioConductor utilities for manipulating chromosome identifiers
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- dep: r-bioc-genomicranges (>= 1.37.2)
- BioConductor representation and manipulation of genomic intervals
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- dep: r-bioc-iranges (>= 2.15.12)
- GNU R low-level containers for storing sets of integer ranges
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- dep: r-bioc-rsamtools (>= 1.31.2)
- GNU R binary alignment (BAM), variant call (BCF), or tabix file import
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- dep: r-bioc-s4vectors (>= 0.23.19)
- BioConductor S4 implementation of vectors and lists
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- dep: r-bioc-summarizedexperiment (>= 1.9.13)
- BioConductor assay container
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- rec: r-bioc-shortread (>= 1.24.0)
- GNU R classes and methods for high-throughput short-read sequencing data
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- rec: r-cran-runit
- GNU R package providing unit testing framework
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- sug: r-bioc-bsgenome
- BioConductor infrastructure for Biostrings-based genome data packages
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- sug: r-bioc-deseq2
- R package for RNA-Seq Differential Expression Analysis
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- sug: r-bioc-genomicfeatures
- GNU R tools for making and manipulating transcript centric annotations
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- sug: r-bioc-rtracklayer
- GNU R interface to genome browsers and their annotation tracks
Загрузка r-bioc-genomicalignments
| Архитектура | Размер пакета | В установленном виде | Файлы |
|---|---|---|---|
| amd64 | 2 073,4 Кб | 2916 Кб | [список файлов] |
| armhf | 2 069,3 Кб | 2887 Кб | [список файлов] |