Skip to content
Sections
>> Trisquel >> Пакеты >> nabia >> gnu-r >> r-bioc-phyloseq
etiona  ] [  nabia  ] [  aramo  ]
[ Источник: r-bioc-phyloseq  ]

Пакет: r-bioc-phyloseq (1.30.0+dfsg-1)

GNU R handling and analysis of high-throughput microbiome census data

The Bioconductor module phyloseq provides a set of classes and tools to facilitate the import, storage, analysis, and graphical display of microbiome census data.

Другие пакеты, относящиеся к r-bioc-phyloseq

  • зависимости
  • рекомендации
  • предложения
  • dep: r-api-3.5
    виртуальный пакет, предоставляемый r-base-core
  • dep: r-api-bioc-3.10
    виртуальный пакет, предоставляемый r-bioc-biocgenerics
  • dep: r-base-core (>= 3.6.1-7)
    GNU R core of statistical computation and graphics system
  • dep: r-bioc-biobase (>= 2.36.2)
    base functions for Bioconductor
  • dep: r-bioc-biocgenerics (>= 0.22.0)
    generic functions for Bioconductor
  • dep: r-bioc-biomformat (>= 1.0.0)
    GNU R interface package for the BIOM file format
  • dep: r-bioc-biostrings (>= 2.40.0)
    GNU R string objects representing biological sequences
  • dep: r-bioc-multtest (>= 2.28.0)
    Bioconductor resampling-based multiple hypothesis testing
  • dep: r-cran-ade4 (>= 1.7-4)
    GNU R analysis of ecological data
  • dep: r-cran-ape (>= 5.0)
    GNU R package for Analyses of Phylogenetics and Evolution
  • dep: r-cran-cluster (>= 2.0.4)
    GNU R package for cluster analysis by Rousseeuw et al
  • dep: r-cran-data.table (>= 1.10.4)
    GNU R extension of Data.frame
  • dep: r-cran-foreach (>= 1.4.3)
    GNU R foreach looping support
  • dep: r-cran-ggplot2 (>= 2.1.0)
    implementation of the Grammar of Graphics
  • dep: r-cran-igraph (>= 1.0.1)
    GNU R network analysis and visualization
  • dep: r-cran-plyr (>= 1.8.3)
    tools for splitting, applying and combining data
  • dep: r-cran-reshape2 (>= 1.4.1)
    Flexibly reshape data: a reboot of the reshape package
  • dep: r-cran-scales (>= 0.4.0)
    Scale functions for visualization
  • dep: r-cran-vegan (>= 2.5)
    Community Ecology Package for R
  • sug: r-bioc-deseq2 (>= 1.16.1)
    R package for RNA-Seq Differential Expression Analysis
  • sug: r-bioc-genefilter (>= 1.58)
    methods for filtering genes from microarray experiments
  • sug: r-cran-knitr (>= 1.16)
    GNU R package for dynamic report generation using Literate Programming
  • sug: r-cran-magrittr (>= 1.5)
    GNU R forward-pipe operator
  • sug: r-cran-rmarkdown (>= 1.6)
    convert R markdown documents into a variety of formats

Загрузка r-bioc-phyloseq

Загрузить для всех доступных архитектур
Архитектура Размер пакета В установленном виде Файлы
all 2 030,3 Кб2961 Кб [список файлов]