Пакет: python3-presto (0.5.13-2)
Ссылки для python3-presto
Ресурсы Trisquel:
Исходный код presto:
Сопровождающий:
Original Maintainers:
- Debian Python Modules Team (Почтовый архив)
- Steffen Moeller
Внешние ресурсы:
- Сайт [presto.readthedocs.io]
Подобные пакеты:
toolkit for processing B and T cell sequences
pRESTO is a toolkit for processing raw reads from high-throughput sequencing of B cell and T cell repertoires.
Dramatic improvements in high-throughput sequencing technologies now enable large-scale characterization of lymphocyte repertoires, defined as the collection of trans-membrane antigen-receptor proteins located on the surface of B cells and T cells. The REpertoire Sequencing TOolkit (pRESTO) is composed of a suite of utilities to handle all stages of sequence processing prior to germline segment assignment. pRESTO is designed to handle either single reads or paired-end reads. It includes features for quality control, primer masking, annotation of reads with sequence embedded barcodes, generation of unique molecular identifier (UMI) consensus sequences, assembly of paired-end reads and identification of duplicate sequences. Numerous options for sequence sorting, sampling and conversion operations are also included.
Другие пакеты, относящиеся к python3-presto
|
|
|
-
- dep: python3
- interactive high-level object-oriented language (default python3 version)
-
- dep: python3-biopython (>= 1.65)
- Python3 library for bioinformatics
-
- dep: python3-numpy
- Fast array facility to the Python 3 language
-
- dep: python3-pandas (>= 0.15)
- data structures for "relational" or "labeled" data
-
- dep: python3-scipy
- scientific tools for Python 3
Загрузка python3-presto
| Архитектура | Размер пакета | В установленном виде | Файлы |
|---|---|---|---|
| all | 69,8 Кб | 490 Кб | [список файлов] |