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Пакет исходного кода: bioperl-run (1.7.3-3)

Ссылки для bioperl-run

Ресурсы Trisquel:

Сопровождающий:

Original Maintainers:

Внешние ресурсы:

Из этого пакета исходного кода собираются следующие двоичные пакеты:
bioperl-run
BioPerl wrappers: scripts
libbio-perl-run-perl
BioPerl wrappers: modules

Другие пакеты, относящиеся к bioperl-run

  • для сборки
  • build-depends-indep
  • adep: debhelper-compat (= 12)
    Пакет недоступен
  • idep: perl
    Larry Wall's Practical Extraction and Report Language
  • idep: libmodule-build-perl
    framework for building and installing Perl modules
  • idep: bioperl (>= 1.7.4)
    Perl tools for computational molecular biology
  • idep: libalgorithm-diff-perl
    module to find differences between files
  • idep: libipc-run-perl
    Perl module for running processes
  • idep: libio-string-perl
    Emulate IO::File interface for in-core strings
  • idep: libxml-twig-perl
    Perl module for processing huge XML documents in tree mode
  • idep: libtest-most-perl
    Perl module with the most commonly needed test functions and features
  • idep: libarray-compare-perl
    Perl module to easily compare arrays
  • idep: libtree-dagnode-perl
    Perl (super)class for representing nodes in a tree
  • idep: amap-align
    Protein multiple alignment by sequence annealing
  • idep: bedtools
    suite of utilities for comparing genomic features
  • idep: ncbi-blast+-legacy
    NCBI Blast legacy call script
  • idep: clustalw
    global multiple nucleotide or peptide sequence alignment
  • idep: emboss
    European molecular biology open software suite
  • idep: exonerate
    generic tool for pairwise sequence comparison
  • idep: hmmer
    profile hidden Markov models for protein sequence analysis
  • idep: hyphy-mpi
    Hypothesis testing using Phylogenies (MPI version)
  • idep: infernal
    inference of RNA secondary structural alignments
  • idep: kalign
    Global and progressive multiple sequence alignment
  • idep: mafft
    Multiple alignment program for amino acid or nucleotide sequences
  • idep: muscle
    Multiple alignment program of protein sequences
  • idep: ncoils
    coiled coil secondary structure prediction
  • idep: phylip
    package of programs for inferring phylogenies
  • idep: phyml
    Phylogenetic estimation using Maximum Likelihood
  • idep: primer3
    tool to design flanking oligo nucleotides for DNA amplification
  • idep: probcons
    PROBabilistic CONSistency-based multiple sequence alignment
  • idep: raxml
    Randomized Axelerated Maximum Likelihood of phylogenetic trees
  • idep: samtools
    processing sequence alignments in SAM, BAM and CRAM formats
  • idep: sim4
    tool for aligning cDNA and genomic DNA
  • idep: tigr-glimmer
    Gene detection in archea and bacteria
  • idep: wise
    comparison of biopolymers, like DNA and protein sequences
  • idep: libwww-perl
    simple and consistent interface to the world-wide web

Download bioperl-run

ФайлРазмер (в Кб)Контрольная сумма MD5
bioperl-run_1.7.3-3.dsc 2,5 Кб 9567a6f6e5e3774d8d2f38b6f2ad21d4
bioperl-run_1.7.3.orig.tar.gz 4 758,0 Кб e582f2dc591b947348670ce1479da109
bioperl-run_1.7.3-3.debian.tar.xz 13,2 Кб 4a18f19db55088a6f3ca58aaec012222
Репозиторий пакетов исходного кода Debian (VCS: Git)
https://salsa.debian.org/med-team/bioperl-run.git
Репозиторий пакетов исходного кода Debian (доступен просмотр)
https://salsa.debian.org/med-team/bioperl-run