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Balík: bedtools (2.30.0+dfsg-2ubuntu0.1)

suite of utilities for comparing genomic features

The BEDTools utilities allow one to address common genomics tasks such as finding feature overlaps and computing coverage. The utilities are largely based on four widely-used file formats: BED, GFF/GTF, VCF, and SAM/BAM. Using BEDTools, one can develop sophisticated pipelines that answer complicated research questions by streaming several BEDTools together.

The groupBy utility is distributed in the filo package.

Ostatné balíky súvisiace s balíkom bedtools

  • závisí
  • odporúča
  • navrhuje
  • dep: libbz2-1.0
    high-quality block-sorting file compressor library - runtime
  • dep: libc6 (>= 2.34)
    GNU C Library: Shared libraries
    tiež virtuálny balík poskytovaný balíkom libc6-udeb
  • dep: libgcc-s1 (>= 3.3.1) [amd64]
    GCC support library
    dep: libgcc-s1 (>= 3.5) [armhf]
    dep: libgcc-s1 (>= 4.2) [arm64, ppc64el]
  • dep: liblzma5 (>= 5.1.1alpha+20120614)
    XZ-format compression library
  • dep: libstdc++6 (>= 11)
    GNU Standard C++ Library v3
  • dep: zlib1g (>= 1:1.1.4)
    compression library - runtime

Stiahnuť bedtools

Stiahnuť pre všetky dostupné architektúry
Architektúra Veľkosť balíka Nainštalovaná veľkosť Súbory
amd64 549.5 kB1512 kB [zoznam súborov]
arm64 519.3 kB1336 kB [zoznam súborov]
armhf 628.2 kB1275 kB [zoznam súborov]
ppc64el 655.7 kB1944 kB [zoznam súborov]