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Balík: lefse (1.1.2-1)

determine features of organisms, clades, taxonomic units, genes

LEfSe (Linear discriminant analysis Effect Size) determines the features (organisms, clades, operational taxonomic units, genes, or functions) most likely to explain differences between classes by coupling standard tests for statistical significance with additional tests encoding biological consistency and effect relevance.

Ostatné balíky súvisiace s balíkom lefse

  • závisí
  • odporúča
  • navrhuje
  • dep: python3
    interactive high-level object-oriented language (default python3 version)
  • dep: python3-biom-format
    Biological Observation Matrix (BIOM) format (Python 3)
  • dep: python3-matplotlib
    Python based plotting system in a style similar to Matlab (Python 3)
  • dep: python3-numpy
    Fast array facility to the Python 3 language
  • dep: python3-rpy2
    Python3 interface to the GNU R language and environment (version 2)
    tiež virtuálny balík poskytovaný balíkom python3-rpy2
  • dep: r-cran-coin
    GNU R package providing conditional inference procedures

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