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[ Zdroj: fermi-lite  ]

Balík: fml-asm (0.1+git20190320.b499514-1)

tool for assembling Illumina short reads in small regions

Fml-asm is a command-line tool for assembling Illumina short reads in regions from 100bp to 10 million bp in size, based on the fermi-lite library. It is largely a light-weight in-memory version of fermikit without generating any intermediate files. It inherits the performance, the relatively small memory footprint and the features of fermikit. In particular, fermi-lite is able to retain heterozygous events and thus can be used to assemble diploid regions for the purpose of variant calling.

Ostatné balíky súvisiace s balíkom fml-asm

  • závisí
  • odporúča
  • navrhuje
  • dep: libc6 (>= 2.14) [amd64]
    GNU C Library: Shared libraries
    tiež virtuálny balík poskytovaný balíkom libc6-udeb
    dep: libc6 (>= 2.17) [arm64, ppc64el]
    dep: libc6 (>= 2.7) [armhf]
  • dep: zlib1g (>= 1:1.1.4)
    compression library - runtime

Stiahnuť fml-asm

Stiahnuť pre všetky dostupné architektúry
Architektúra Veľkosť balíka Nainštalovaná veľkosť Súbory
amd64 66.8 kB159 kB [zoznam súborov]
arm64 61.1 kB143 kB [zoznam súborov]
armhf 66.1 kB118 kB [zoznam súborov]
ppc64el 75.8 kB211 kB [zoznam súborov]