Balík: pigx-rnaseq (0.0.19-2)

Odkazy pre pigx-rnaseq

Zdroje Trisquel:

• Install using apturl
• Entry at directory.fsf.org
• Hlásenia chýb
• Changelog
• Autori a licencia

Stiahnuť zdrojový balík pigx-rnaseq:

• [pigx-rnaseq_0.0.19-2.dsc]
• [pigx-rnaseq_0.0.19.orig.tar.xz]
• [pigx-rnaseq_0.0.19-2.debian.tar.xz]

Správca:

• Debian Med Packaging Team (Konferencia)

Original Maintainers:

• Debian Med Packaging Team (Konferencia)
• Steffen Moeller

Externé zdroje:

• Domovská stránka [github.com]

Podobné balíky:

• pyensembl
• r-bioc-monocle
• berkeley-express-doc
• snakemake
• berkeley-express
• r-bioc-scater
• mahimahi
• vistrails
• r-bioc-bitseq
• bio-tradis
• r-bioc-drimseq

Ostatné balíky súvisiace s balíkom pigx-rnaseq

• dep: fastp

  Ultra-fast all-in-one FASTQ preprocessor

• dep: fastqc

  quality control for high throughput sequence data

• dep: hisat2

  graph-based alignment of short nucleotide reads to many genomes

  alebo rna-star

  ultrafast universal RNA-seq aligner

• dep: libjs-jquery-datatables

  jQuery plug-in that makes nice tables from different data sources

• dep: libjs-jquery-tablesorter

  jQuery flexible client-side table sorting plugin

• dep: multiqc

  output integration for RNA sequencing across tools and samples

• dep: pandoc-citeproc

  Pandoc support for Citation Style Language - tools

• dep: python3

  interactive high-level object-oriented language (default python3 version)

• dep: python3-deeptools

  platform for exploring biological deep-sequencing data

• dep: python3-htseq

  Python3 high-throughput genome sequencing read analysis utilities

• dep: r-bioc-deseq2

  R package for RNA-Seq Differential Expression Analysis

• dep: r-bioc-rtracklayer

  GNU R interface to genome browsers and their annotation tracks

• dep: r-bioc-summarizedexperiment

  BioConductor assay container

• dep: r-bioc-tximport

  transcript-level estimates for biological sequencing

• dep: r-cran-corrplot

  Visualization of a Correlation Matrix

• dep: r-cran-crosstalk

  GNU R inter-widget interactivity for HTML widgets

• dep: r-cran-data.table

  GNU R extension of Data.frame

• dep: r-cran-dt (>= 0.15+dfsg-2)

  GNU R wrapper of the JavaScript library 'DataTables'

• dep: r-cran-ggplot2

  implementation of the Grammar of Graphics

• dep: r-cran-ggpubr

  GNU R ggplot2 based publication ready plots

• dep: r-cran-ggrepel

  auto-position non-overlapping text labels in plots

• dep: r-cran-gprofiler2

  Interface to the 'g:Profiler' Toolset

• dep: r-cran-pheatmap

  GNU R package to create pretty heatmaps

• dep: r-cran-plotly

  create interactive web graphics via 'plotly.js' in GNU R

• dep: r-cran-reshape2

  Flexibly reshape data: a reboot of the reshape package

• dep: r-cran-rjson

  GNU R package for converting between R and JSON objects

• dep: r-cran-rlang

  Functions for Base Types and Core R and 'Tidyverse' Features

• dep: r-cran-rmarkdown

  convert R markdown documents into a variety of formats

• dep: r-cran-scales

  Scale functions for visualization

• dep: salmon

  wicked-fast transcript quantification from RNA-seq data

• dep: samtools

  processing sequence alignments in SAM, BAM and CRAM formats

• dep: snakemake

  pythonic workflow management system

• dep: trim-galore

  automate quality and adapter trimming for DNA sequencing

• rec: hisat2

  graph-based alignment of short nucleotide reads to many genomes

• rec: rna-star

  ultrafast universal RNA-seq aligner

Stiahnuť pigx-rnaseq