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Balík: smrtanalysis (0~20210112)

software suite for single molecule, real-time sequencing

SMRT® Analysis is a powerful, open-source bioinformatics software suite available for analysis of DNA sequencing data from Pacific Biosciences’ SMRT technology. Users can choose from a variety of analysis protocols that utilize PacBio® and third-party tools. Analysis protocols include de novo genome assembly, cDNA mapping, DNA base-modification detection, and long-amplicon analysis to determine phased consensus sequences.

This is a metapackage that depends on the components of SMRT Analysis.

Ostatné balíky súvisiace s balíkom smrtanalysis

  • závisí
  • odporúča
  • navrhuje
  • dep: blasr
    mapping single-molecule sequencing reads
  • dep: pbbamtools
    processing Pacific Biosciences binary alignment/map files
  • dep: pbdagcon
    sequence consensus using directed acyclic graphs
  • sug: falcon
    Balík nie je dostupný
  • sug: kineticstools
    detection of DNA modifications
  • sug: pbalign
    Balík nie je dostupný
  • sug: pbbarcode
    Balík nie je dostupný
  • sug: pbgenomicconsensus
    Balík nie je dostupný
  • sug: pbh5tools
    Balík nie je dostupný

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