Balík: python3-freecontact (1.1-6build8)
Odkazy pre python3-freecontact
Zdroje Trisquel:
Stiahnuť zdrojový balík python-freecontact:
- [python-freecontact_1.1-6build8.dsc]
- [python-freecontact_1.1.orig.tar.gz]
- [python-freecontact_1.1-6build8.debian.tar.xz]
Správca:
Original Maintainers:
- Debian Med Packaging Team (Konferencia)
- Laszlo Kajan
- Andreas Tille
- Alexandre Mestiashvili
Externé zdroje:
- Domovská stránka [rostlab.org]
Podobné balíky:
fast protein contact predictor - binding for Python3
FreeContact is a protein residue contact predictor optimized for speed. Its input is a multiple sequence alignment. FreeContact can function as an accelerated drop-in for the published contact predictors EVfold-mfDCA of DS. Marks (2011) and PSICOV of D. Jones (2011).
FreeContact is accelerated by a combination of vector instructions, multiple threads, and faster implementation of key parts. Depending on the alignment, 8-fold or higher speedups are possible.
A sufficiently large alignment is required for meaningful results. As a minimum, an alignment with an effective (after-weighting) sequence count bigger than the length of the query sequence should be used. Alignments with tens of thousands of (effective) sequences are considered good input.
jackhmmer(1) from the hmmer package, or hhblits(1) from hhsuite can be used to generate the alignments, for example.
This package contains the Python3 binding.
Ostatné balíky súvisiace s balíkom python3-freecontact
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- dep: libboost-python1.83.0 (>= 1.83.0)
- Boost.Python Library
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- dep: libboost-python1.83.0-py312
- virtuálny balík poskytovaný balíkom libboost-python1.83.0
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- dep: libc6 (>= 2.32)
- GNU C Library: Shared libraries
tiež virtuálny balík poskytovaný balíkom libc6-udeb
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- dep: libfreecontact0t64 (>= 1.0.21)
- fast protein contact predictor library
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- dep: libgcc-s1 (>= 3.0) [riscv64]
- GCC support library
- dep: libgcc-s1 (>= 3.3.1) [nie armhf, riscv64]
- dep: libgcc-s1 (>= 3.5) [armhf]
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- dep: libstdc++6 (>= 11)
- GNU Standard C++ Library v3
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- dep: python3 (<< 3.13)
- interactive high-level object-oriented language (default python3 version)
- dep: python3 (>= 3.12~)
Stiahnuť python3-freecontact
| Architektúra | Veľkosť balíka | Nainštalovaná veľkosť | Súbory |
|---|---|---|---|
| amd64 | 76.5 kB | 250 kB | [zoznam súborov] |
| arm64 | 74.8 kB | 273 kB | [zoznam súborov] |
| armhf | 77.0 kB | 224 kB | [zoznam súborov] |
| ppc64el | 78.3 kB | 273 kB | [zoznam súborov] |
| riscv64 | 78.1 kB | 245 kB | [zoznam súborov] |