[ Zdroj: bowtie2 ]
Balík: bowtie2 (2.3.4.1-1)
Odkazy pre bowtie2
Zdroje Trisquel:
Stiahnuť zdrojový balík bowtie2:
Správca:
Original Maintainers:
- Debian Med Packaging Team (Konferencia)
- Alexandre Mestiashvili
- Andreas Tille
Externé zdroje:
- Domovská stránka [bowtie-bio.sourceforge.net]
Podobné balíky:
ultrafast memory-efficient short read aligner
is an ultrafast and memory-efficient tool for aligning sequencing reads to long reference sequences. It is particularly good at aligning reads of about 50 up to 100s or 1,000s of characters, and particularly good at aligning to relatively long (e.g. mammalian) genomes.
Bowtie 2 indexes the genome with an FM Index to keep its memory footprint small: for the human genome, its memory footprint is typically around 3.2 GB. Bowtie 2 supports gapped, local, and paired-end alignment modes
Ostatné balíky súvisiace s balíkom bowtie2
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- dep: libc6 (>= 2.14)
- GNU C Library: Shared libraries
tiež virtuálny balík poskytovaný balíkom libc6-udeb
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- dep: libgcc1 (>= 1:3.0)
- GCC support library
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- dep: libstdc++6 (>= 5.2)
- GNU Standard C++ Library v3
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- dep: libtbb2
- parallelism library for C++ - runtime files
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- dep: python
- interactive high-level object-oriented language (default version)
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- dep: zlib1g (>= 1:1.2.6)
- compression library - runtime
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- sug: bowtie2-examples
- Examples for bowtie2
Stiahnuť bowtie2
| Architektúra | Veľkosť balíka | Nainštalovaná veľkosť | Súbory |
|---|---|---|---|
| amd64 | 1,146.9 kB | 4980 kB | [zoznam súborov] |