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Balík: ncbi-blast+ (2.6.0-1)

next generation suite of BLAST sequence search tools

The Basic Local Alignment Search Tool (BLAST) is the most widely used sequence similarity tool. There are versions of BLAST that compare protein queries to protein databases, nucleotide queries to nucleotide databases, as well as versions that translate nucleotide queries or databases in all six frames and compare to protein databases or queries. PSI-BLAST produces a position-specific-scoring-matrix (PSSM) starting with a protein query, and then uses that PSSM to perform further searches. It is also possible to compare a protein or nucleotide query to a database of PSSM’s. The NCBI supports a BLAST web page at blast.ncbi.nlm.nih.gov as well as a network service.

Ostatné balíky súvisiace s balíkom ncbi-blast+

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  • dep: libbz2-1.0
    high-quality block-sorting file compressor library - runtime
  • dep: libc6 (>= 2.15)
    GNU C Library: Shared libraries
    tiež virtuálny balík poskytovaný balíkom libc6-udeb
  • dep: libgcc1 (>= 1:3.4) [amd64]
    GCC support library
    dep: libgcc1 (>= 1:4.2) [i386]
  • dep: libgnutls30 (>= 3.5.6)
    GNU TLS library - main runtime library
  • dep: libgomp1 (>= 4.9)
    GCC OpenMP (GOMP) support library
  • dep: libpcre3
    Old Perl 5 Compatible Regular Expression Library - runtime files
  • dep: libstdc++6 (>= 5.2)
    GNU Standard C++ Library v3
  • dep: ncbi-data
    Platform-independent data for the NCBI toolkit
  • dep: perl
    Larry Wall's Practical Extraction and Report Language
  • dep: python
    interactive high-level object-oriented language (default version)
  • dep: zlib1g (>= 1:1.2.0)
    compression library - runtime
  • enh: t-coffee
    Multiple Sequence Alignment

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Architektúra Veľkosť balíka Nainštalovaná veľkosť Súbory
amd64 9,224.7 kB39314 kB [zoznam súborov]
i386 10,002.4 kB39213 kB [zoznam súborov]